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2 edition of Towards a fluorescence resonance energy transfer (FRET) strategy for development of a biosensor for detection of nucleic acid hybridization on fused silica surfaces. found in the catalog.

Towards a fluorescence resonance energy transfer (FRET) strategy for development of a biosensor for detection of nucleic acid hybridization on fused silica surfaces.

Melissa Massey

Towards a fluorescence resonance energy transfer (FRET) strategy for development of a biosensor for detection of nucleic acid hybridization on fused silica surfaces.

by Melissa Massey

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Published .
Written in English


About the Edition

Thiazole orange (TO) with different tethers were synthesized to be attached to oligonucleotides. The FRET of TO in solution with double-stranded DNA (dsDNA) was investigated with BlackHole (BHQ1) or ((4-dimethylamino)phenyl)azo)benzoic acid (DABCYL) quenchers which decreased the fluorescence 2.9 +/- 7% and 2.5 +/- 10% times, respectively. A quenching mechanism could therefore be designed to transduce hybridization.The FRET of N,N,N,N-tetramethylcarboxyrhodamine (TAMRA) and IowaBlackRQ RTM (IABLK) linked to complementary oligonucleotides immobilized on glass substrates was investigated; IABLK quenched TAMRA fluorescence. However, surface bound dsDNA caused some self-quenching of TAMRA.Solution FRET using TAMRA/IABLK at 24.5°C and 60°C with complementary and mismatched DNA was measured to investigate potential for mismatch detection. The probe sequence was based on the determinate for Spinal Muscular Atrophy (SMA). Signal intensity differed between complementary and the mismatch samples at 60°C, indicating mismatch detection potential. Results suggest the possibility of designing tethered fluorophore-quencher pairs for transduction of hybridization for development of optical nucleic acid biosensors for SMA screening.

The Physical Object
Pagination184 leaves.
Number of Pages184
ID Numbers
Open LibraryOL19214622M
ISBN 10049402156X

Fluorescence resonance energy transfer (FRET) is a technique half a century old, yet, due to recent advances, it is undergoing a rebirth. FRET, which relies on the distance-dependent transfer of energy from a donor fluorophore to an acceptor fluorophore, is one of the few tools available for measuring nanometer scale.   Fluorescence resonance energy transfer (FRET) * is a distance-dependent physical process by which energy is transferred nonradiatively from an excited molecular fluorophore (the donor) to another fluorophore (the acceptor) by means of intermolecular long-range dipole–dipole coupling. FRET can be an accurate measurement of molecular proximity at angstrom distances (10– Å) and Cited by:

These two mechanisms together determine essential fluorescence factors and phenomena such as, molecular cross-section, Stokes shift, emission and absorption spectra, quantum yield, signal-to-noise ratio, Forster resonance energy transfer (FRET), fluorescence recovery after photobleaching (FRAP) and fluorescence lifetime.   Day, R. N. Measuring protein interactions using Förster resonance energy transfer and fluorescence lifetime imaging microscopy. Meth – (). CASCited by:

Introduction. Fluorescence Resonance Energy Transfer (FRET) is an energy transfer process between the fluorescent dye to its high sensitivity to the change of distance between the dyes, it has received great interest for the study of biological technique has a spatial resolution of sub-nanometer, and can be used as a probe of inter- and intra-molecular dynamics of. Fluorescence resonance energy transfer (FRET), in which a fluorescent donor molecule transfers energy via a nonradiative dipoldipole interaction to an acceptor molecule (which is usually a fluorescent molecule), is a standard spectroscopic technique for measuring distancesin the A .


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Towards a fluorescence resonance energy transfer (FRET) strategy for development of a biosensor for detection of nucleic acid hybridization on fused silica surfaces by Melissa Massey Download PDF EPUB FB2

Förster resonance energy transfer (FRET), fluorescence resonance energy transfer (FRET), resonance energy transfer (RET) or electronic energy transfer (EET) is a mechanism describing energy transfer between two light-sensitive molecules (chromophores). A donor chromophore, initially in its electronic excited state, may transfer energy to an acceptor chromophore through nonradiative dipole.

Fluorescence Resonance Energy Transfer (FRET), a non-radiative physical phenomenon, is being used more and more in biomedical research today and the efficiency of the energy transfer process is Author: Syed Arshad Hussain. The applications of Fluorescence resonance energy transfer (FRET) have expanded tremendously in the last 25 years, and the technique has become a staple technique in many biological and.

Förster resonance energy transfer (FRET) is an electrostatic dipole–dipole interaction between molecules in close proximity in which energy from an initially excited donor molecule is transferred, non-radiatively, to an acceptor molecule [29–31].In so-called heteroFRET this process takes place between spectrally distinct donors and acceptors.

FRET between like molecules, termed homoFRET. The technique of fluorescence resonance energy transfer (more commonly referred to by the acronym FRET), when applied to optical microscopy, permits determination of the approach between two molecules within several nanometers, a distance sufficiently close for molecular interactions to occur.

The technique of fluorescence resonance energy transfer (more commonly referred to by the acronym. W.J. Thomsen, D.P. Behan, in Comprehensive Medicinal Chemistry II, Time-resolved fluorescence resonance energy transfer cAMP assay. A high-throughput cAMP assay kit based on time-resolved fluorescence energy transfer technology is available from Cisbio (HTRF).

The basis of this assay consists of a reduction in assay signal as endogenous cAMP acts to inhibit the interaction. Fluorescence Resonance Energy Transfer (FRET) is a physical phenomenon first described over 50 years ago, that is being used more and more in biomedical research and drug discovery today.

FRET relies on the distance-dependent transfer of energy from a donor molecule to an acceptor molecule. Hussain et. An Introduction to Fluorescence Resonance Energy Transfer (FRET) each molecule (K2) and the spectral overlap integral of the donor-acceptor pair (J) and is given by [3], 6 0 1 3 4 R0 10 .fd.J) A = × η− (2) In summary, the rate of FRET depends upon the extent of spectral overlap between the donor-Author: Syed Arshad Hussain.

Resonance energy transfer (RET), the transport of electronic energy from one atom or molecule to another, has significant importance to a number of diverse areas of science.

Since the pioneering experiments on RET by Cario and Franck inthe theoretical understanding of the process has been continually refined. This review presents a historical account of the post-Förster outlook on RET Cited by: Resonance Energy Transfer The resonance transfer of energy between molecules, or between sites within a large molecule, plays a central role in many areas of modern chemistry and physics.

In biophysics, for example, this process defines the migration of excitation energy within photosynthetic systems (commonly the Frster mechanism).Cited by: in fluorescence resonance energy transfer studies, the MoFlo High Performance Cell Sorter is an ideal platform for detecting these proteins and isolating cells with desired expression patterns.

References 1. Szollosi J, Damjanovich S, Matyus L, Application of fluorescence resonance energy transfer in the clinical laboratory: routine and research.

Recent advances in Fluorescence Resonance Energy Transfer (FRET) provides a way to measure and understand different biological systems and molecular interactions in nanometer order. In this report the introduction and principle of the FRET process have been : Syed Arshad Hussain.

FRET (Fluorescence Resonance Energy Transfer) || Molecular Biology Technique to study molecular interactions. Source:   Introduction. Luminescence Resonance Energy Transfer (LRET) is a derivative of the well-known Fluorescence Resonance Energy Transfer (FRET) technique r to FRET, LRET can be used to measure distances and distance changes between donor and acceptor fluorophores attached to specific sites on the protein of interest within the range of Å Cited by: 3.

Luminescence Resonance Energy Transfer (LRET) is a derivative of the well-known Fluorescence Resonance Energy Transfer (FRET) technique r to FRET, LRET can be used to measure distances and distance changes between donor and acceptor fluorophores attached to specific sites on the protein of interest within the range of Å The principles of LRET are also similar to.

Fluorescence Resonance Energy Transfer (FRET) and a Novel Label Free Molecular Switching Construct. Melissa Massey. Doctor of Philosophy. Department of Chemistry University of Toronto.

Abstract. The research presented in this thesis introduces design criteria for development of a new type of self-contained optical : Melissa Massey. Lifetime-based Foerster Resonance Energy Transfer (FLIM-FRET) FRET is used as a molecular ruler due to its sensitivity in the range of nm.

The energy transfer results in donor quenching and leads to changes in the fluorescence intensity and the fluorescence lifetimes of the two fluorophores. Fluorescence resonance energy transfer (FRET) is a distance-dependent interaction between the electronic excited states of two dye molecules in which excitation is transferred from a donor molecule to an acceptor molecule without emission of a efficiency of FRET is dependent on the inverse sixth power of the intermolecular separation, making it useful over distances comparable to.

Fluorescence is the emission of light by a substance that has absorbed light or other electromagnetic is a form of most cases, the emitted light has a longer wavelength, and therefore lower energy, than the absorbed most striking example of fluorescence occurs when the absorbed radiation is in the ultraviolet region of the spectrum, and thus invisible.

Fluorescence resonance energy transfer (FRET) has become widely used in all applications of fluorescence, including medical diagnostics, DNA analysis, and optical imaging. The widespread use of FRET is due to the favorable distances for energy transfer, which are typically the size of a protein or the thickness of a membrane.

U.S. Department of Energy Office of Scientific and Technical Information Search terms: Advanced search options Advanced Search Options Advanced Search queries use a traditional Term Search.In the recent Antibody Applications series, we've covered 2 techniques that are ideal for studying protein-protein interactions: PLA and BRET.

Continuing on this topic, I will introduce a third technique to be added to your repertoire for protein interactions studies, known as FRET, or Fluorescence Resonance Energy Transfer.Single molecule fluorescence resonance energy transfer (or smFRET) is a biophysical technique used to measure distances at the nanometer scale in single molecules, typically is an application of FRET wherein a pair of donor and acceptor fluorophores are excited and detected on a single molecule level.

In contrast to "ensemble FRET" which provides the FRET signal of a high.